Easy Baked Cheese-Stuffed Poblano Peppers: A Healthy and Flavorful No-Fry Delight

Discover a delightful twist on the classic Mexican chile rellenos with this incredibly easy and healthy Cheese Stuffed Poblano Peppers recipe. Unlike traditional chile rellenos which are often battered and fried, this lighter, no-fry version celebrates the unique, earthy flavor of poblano peppers in a simple yet profoundly satisfying way. Perfect as a vibrant side dish or a fulfilling vegetarian main, these baked peppers are sure to become a new favorite in your culinary repertoire.
Poblano peppers, hailing from Puebla, Mexico, are renowned for their mild heat and distinct flavor profile, which shines through beautifully in this dish. While chile rellenos showcase the pepper’s versatility by stuffing it and then frying, our recipe offers a fresh perspective. It’s designed to highlight the rich, smoky notes of the poblano itself, complemented by a melty cheese filling and aromatic spices, all without the added oil of frying. This results in a dish that’s both comforting and remarkably fresh.
We absolutely adore incorporating poblano peppers into our cooking, appreciating their subtle warmth and robust character. If you share our passion for these versatile chiles, you might also enjoy exploring some of our other creations. Be sure to check out our Roasted Poblano and Smoked Gouda Mac and Cheese for a creamy, smoky indulgence, our Chicken Fried Steak with Ancho Poblano Gravy for a unique savory twist, or our Ancho Chile Corn and Poblano Crab Cakes for a taste of the sea with a peppery kick.
Essential Ingredients for Your Stuffed Poblano Masterpiece
Crafting these delectable cheese-stuffed poblano peppers requires just a handful of fresh, high-quality ingredients. Each component plays a crucial role in building the dish’s balanced and inviting flavor profile.
- Poblano Peppers: The star of our dish! These mild green peppers, originating from Puebla, Mexico, are distinguished by their deep green color, slightly wrinkled skin, and an earthy, robust flavor. They offer a gentle heat, typically ranking between 1,000 to 2,000 Scoville Heat Units (SHU), making them far milder than jalapeños. When selecting poblanos, look for firm, glossy peppers free from blemishes. Their boat-like shape after preparation makes them ideal for stuffing.
- Pine Nuts: These small, elongated nuts are harvested from various species of pine trees and boast a delicate, buttery flavor. Commonly found in traditional basil pesto, pine nuts add a delightful textural contrast and a rich, subtle nuttiness to the cheese filling. Toasting them briefly enhances their inherent flavor, bringing out a deeper, more aromatic quality that perfectly complements the peppers and cheese.
- Muenster Cheese: A semi-soft, pale yellow cheese known for its mild flavor and excellent melting properties. Muenster cheese is the perfect choice for these stuffed peppers because it melts smoothly without becoming overly oily or greasy. Its gentle taste allows the vibrant flavors of the poblano and pine nuts to truly shine, contributing a creamy, luscious texture to the filling. It’s also a fantastic option for grilled cheese sandwiches, showcasing its versatility.
- Smoked Paprika: This spice is derived from dried and smoked pimiento peppers, offering a rich, robust, and smoky aroma. The addition of smoked paprika is key to this recipe, as its deep smoky notes beautifully enhance and complement the inherent earthiness of the poblano peppers. It imparts a subtle “grilled” essence, elevating the dish without overpowering the other ingredients.
- Thyme Leaves: Fresh thyme leaves are sprinkled over the finished peppers, providing a fragrant, earthy, and slightly floral aroma. Thyme adds a touch of herbaceous sophistication, brightens the overall flavor, and delivers a fresh, aromatic finish to these savory stuffed poblanos. Using fresh leaves is highly recommended for the best flavor and visual appeal.
Crafting Your Stuffed Poblano Peppers: A Simple Step-by-Step Guide
Preparing these cheese-stuffed poblanos is remarkably straightforward and doesn’t require any advanced culinary techniques. You’ll be amazed at how quickly you can create such a flavorful dish!
- Prepare the Peppers for Stuffing: Begin by preheating your oven to 350°F (175°C). Carefully slice off the very top lengthwise from each poblano pepper, exposing the seed pod but ensuring the stem remains intact. This creates a natural “boat” to hold your delicious filling. Keep the sliced-off pepper pieces; you’ll dice them into small, fine pieces to add to the cheese mixture later. Gently remove all the seeds and any excess white pith from inside the peppers, especially around the stem area, to prevent any bitterness and to maximize space for the filling.
- Par-Cook the Peppers to Perfection: Once cleaned, arrange the poblano pepper “boats” on a baking sheet. Place them in your preheated 350°F (175°C) oven and bake for 15 minutes. This crucial step, known as par-cooking, softens the peppers to an ideal al dente consistency, ensuring they are tender but still hold their shape. Remove them from the oven and allow them to cool slightly while you prepare the filling. This cooling period makes them easier to handle for stuffing.
- Assemble the Flavorful Filling and Stuff the Peppers: While your peppers are par-cooking, toast the pine nuts. In a dry pan over medium heat, gently toast the pine nuts for 3-4 minutes, stirring frequently, until they are lightly golden and fragrant. Be careful not to burn them, as they can toast quickly. Once toasted, combine the warm pine nuts with the small-diced pieces of raw poblano pepper (the parts you sliced off earlier) and the cubed Muenster cheese in a bowl. Mix thoroughly. Now, generously stuff each par-cooked poblano pepper with this delightful cheese and pine nut mixture.
- Finish Baking and Broil for a Golden Top: Carefully place the stuffed peppers back onto the baking sheet. Return them to the oven and bake for an additional 5 minutes, allowing the cheese to begin melting and the flavors to meld. After 5 minutes, switch your oven to the broiler setting. Broil the peppers for another 2-3 minutes, keeping a close eye on them, until the cheese is completely melted, bubbly, and slightly golden on top. This broiling step adds a beautiful finish and ensures a perfectly gooey center.
- Garnish and Serve: Once the peppers are done, carefully remove them from the oven. Immediately sprinkle the smoked paprika and fresh thyme leaves over the top of each stuffed poblano. The residual heat will warm the spices and herbs, releasing their aromas. Serve these delicious Cheese Stuffed Poblano Peppers hot, either as a captivating side dish or as a satisfying main course. Enjoy the exquisite blend of earthy poblano, creamy cheese, and smoky notes!

Flexible Options: Ingredient Swaps for Your Stuffed Peppers
One of the beauties of this recipe is its adaptability. Feel free to make these substitutions based on what you have on hand or to accommodate dietary preferences:
- Peppers: If poblano peppers are not available, or if you prefer an even milder flavor, you can certainly use bell peppers (any color) in their place. While this will alter the dish’s characteristic smoky and earthy undertones, it will still yield a wonderfully tasty and colorful stuffed pepper dish. Ensure you choose bell peppers of a similar size to the poblanos for even cooking.
- Pine Nuts: For those with nut allergies, or simply if you don’t have pine nuts, excellent alternatives include sunflower seeds or pumpkin seeds (pepitas). Toasting these seeds beforehand will provide a similar textural crunch and enhance their nutty flavor. If you prefer to omit nuts and seeds entirely, the dish will still be delicious with just the cheese and diced peppers providing the core flavors.
- Smoked Paprika: If the smoky flavor isn’t to your liking, or if you prefer a different profile, sweet paprika offers a vibrant color and mild, fruity notes, while hot paprika will introduce a pleasant warmth and spiciness. Either option will still contribute depth and color to the dish without the smokiness.
Creative Twists: Elevating Your Stuffed Poblano Peppers
This recipe provides a fantastic foundation, but don’t hesitate to experiment with these variations to customize your stuffed peppers to your taste:
- Make it Spicy: For those who crave an extra kick, a sprinkle of cayenne pepper on top of the finished dish will add a fiery touch. Alternatively, for a more integrated heat, finely dice a jalapeño or serrano pepper and mix it into the cheese filling. For a truly bold and spicy experience, you could even replace the poblano peppers with larger jalapeño peppers, though be mindful of their increased heat level.
- Try a Different Cheese: The choice of cheese can significantly influence the final flavor and texture. Beyond Muenster, many other excellent melting cheeses would work beautifully. Consider Gouda for a slightly nutty and caramel-like flavor, Havarti for its buttery richness and smooth melt, or Swiss cheese for a mild, distinctive tang. A blend of cheeses, such as Monterey Jack and a touch of sharp cheddar, can also add complexity.
- Add Shredded Chicken or Pork: To transform these into a more substantial and protein-packed meal, incorporate cooked, shredded chicken or pork into the cheese filling. Leftover rotisserie chicken or slow-cooked pulled pork would be perfect. Ensure the meat is seasoned well before adding it to the mixture for an extra layer of flavor. This variation makes the dish a hearty main course.
- Incorporate Vegetables: Boost the nutritional content and flavor by adding finely diced vegetables to the filling. Sautéed mushrooms, corn kernels, black beans, or finely chopped spinach can add texture, nutrients, and a burst of additional flavors.
- Top with Sauce: While delicious on its own, these peppers can be elevated with a light sauce. A drizzle of a mild salsa verde, a fresh tomato sauce, or even a creamy avocado crema could add a wonderful moistness and an extra layer of flavor.
Minimal Equipment, Maximum Flavor
You don’t need any fancy kitchen gadgets or specialized equipment to prepare these delightful stuffed poblano peppers. This recipe embraces simplicity, relying on fundamental kitchen tools that most home cooks already possess:
- Sharp Knife: Essential for cleanly slicing the peppers, dicing the reserved pepper pieces, and preparing the cheese. A good quality, sharp chef’s knife makes the preparation process safe and efficient.
- Cutting Board: A stable surface for all your chopping and slicing needs, ensuring safety and ease of preparation.
- Baking Sheet: A standard baking sheet is all you need to par-cook your peppers and then finish baking them to gooey perfection. A rimmed baking sheet is ideal to contain any juices.
- Mixing Bowl: A medium-sized bowl for combining your cheese, pine nuts, and diced peppers before stuffing.
- Dry Pan (Skillet): Used for toasting the pine nuts to enhance their flavor. Any small to medium skillet will work.
The beauty of this recipe lies in its straightforward approach, proving that you can achieve incredibly delicious results with just basic kitchen essentials.
Storing and Reheating Your Stuffed Poblano Peppers
These cheese-stuffed poblano peppers are designed to be quick and easy to prepare, making them ideal for enjoying fresh out of the oven. However, if you find yourself with leftovers, proper storage and reheating will ensure they remain delicious.
For best quality, we recommend preparing these peppers fresh whenever possible. The texture of the peppers and the gooeyness of the cheese are at their peak shortly after cooking. If you do have leftovers, allow them to cool completely to room temperature before storing. This prevents condensation from building up, which can make the peppers soggy.
Transfer the cooled stuffed peppers to an airtight container. They can be safely stored in the refrigerator for up to 3-5 days. To reheat, you have a couple of excellent options:
- Microwave: For a quick reheat, place the stuffed peppers on a microwave-safe plate. Heat on medium power for 1-2 minutes, or until thoroughly heated through. Be mindful that microwaving can sometimes alter the texture of the pepper, making it slightly softer, and the cheese might not be as crispy.
- Oven: For superior results that best preserve the texture of the pepper and the melted cheese, reheat in a pre-heated 300°F (150°C) oven. Place the peppers on a baking sheet and heat for 10-15 minutes, or until the cheese is bubbly and the peppers are warmed through. This method helps maintain a better texture and prevents the cheese from becoming overly soft or oily.
Avoid freezing these peppers, as the texture of the poblano can become overly soft and watery upon thawing, and the cheese might separate. Enjoy your leftovers with ease, knowing they’ll still be a treat!
Expert Tips to Elevate the Flavor of Your Stuffed Poblanos
Achieving truly exceptional flavor in your cheese-stuffed poblano peppers is all about paying attention to a few key details. These top tips will help you unlock the full potential of this simple recipe:
Toast Your Pine Nuts for Maximum Impact: While Muenster cheese is wonderfully mild and melty, it’s not overly assertive in flavor. The pine nuts, therefore, play a crucial role in providing both texture and a nutty depth. We’ve experimented with various nuts, and they all work well, making this a perfect opportunity for culinary creativity. However, the absolute best way to utilize pine nuts (or any nut in this recipe) is to toast them first. A quick toast in a dry pan over medium heat for 3-4 minutes brings out their natural oils, intensifying their buttery flavor and adding a more pronounced, aromatic crunch. This small step makes a significant difference.
Harness the Power of Smoked Paprika: When baking these peppers in the oven, smoked paprika is the perfect addition. It imparts a delightful “outdoor grill” flavor to the poblanos without overwhelming them with an actual smoky taste. This subtle hint of smokiness complements the pepper’s earthy notes beautifully, adding a layer of complexity that transforms the dish. Sprinkle it on just after the peppers come out of the oven to allow the heat to release its full aroma.
Master the Par-Baking Technique: The secret to the perfect texture of the pepper “shell” lies in the par-baking step. This initial bake softens the poblano to an ideal consistency that is neither mushy nor overly crunchy – think al dente! It ensures the pepper is tender enough to eat comfortably but still retains a slight bite and its structural integrity to hold the stuffing. We’ve applied this same technique to jalapeño peppers with similarly spicy and flavorful results, offering a great alternative if you prefer more heat. However, the poblano remains our top choice for its balanced flavor and mildness, providing a versatile canvas for the cheese filling.
By incorporating these simple yet effective tips, you’ll ensure every bite of your cheese-stuffed poblano peppers is bursting with enhanced flavor and delightful texture.

Frequently Asked Questions About Stuffed Poblano Peppers
Here are answers to some common questions about this delicious and versatile recipe:
Poblano peppers are generally considered very mild in terms of heat and spiciness, making them accessible to a wide range of palates. To put it in perspective, they typically score between 1,000-2,000 Scoville Heat Units (SHU) on the Scoville scale, which is the standard measure for pepper heat levels. In contrast, a jalapeño pepper can range from 2,500 SHU on the milder side up to 8,000 SHU, and much hotter varieties like habanero peppers can reach 150,000 SHU or more. This makes poblanos a great choice for adding flavor without overwhelming heat. Interestingly, when poblano peppers are dried, they are known as ancho chiles, which are a staple in many Mexican sauces for their deep, fruity flavor.
While any good melting cheese will work well for these stuffed peppers, we particularly favor Muenster cheese for both its outstanding texture and mild flavor. Muenster cheese melts beautifully and is less prone to “shedding fat” and becoming an oily mess, a common issue with some other cheeses like cheddar. Its gentle, creamy taste ensures that the star of the dish—the earthy, slightly smoky poblano pepper—remains the prominent flavor. This balance allows the poblano’s unique characteristics to shine through, creating a harmonious and satisfying experience. Other great melting cheese options include Monterey Jack, mild cheddar (used sparingly to avoid oiliness), or a Mexican blend.
Yes, you can certainly do some prep work in advance! You can par-cook the poblano peppers as directed and prepare the cheese and pine nut filling. Store the par-cooked peppers and the filling separately in airtight containers in the refrigerator for up to 1-2 days. When you’re ready to cook, simply stuff the peppers with the prepared filling and proceed with the baking and broiling steps. This makes meal prep quicker and easier for busy weeknights.
When selecting poblano peppers, look for those that are firm to the touch, have a deep, vibrant green color, and are free from any soft spots, blemishes, or excessive wrinkles. A healthy sheen indicates freshness. While some wrinkling is natural for poblanos, avoid those that look shriveled or dull. Choose peppers that are roughly uniform in size for more even cooking and easier stuffing, generally about 4-6 inches long. The stem should also look fresh and green.
Enjoy Your Culinary Creation!
We truly hope you enjoy preparing and savoring this fantastic recipe for Cheese Stuffed Poblano Peppers. It’s a testament to how simple ingredients can come together to create something truly special. If you give it a try and love it as much as we do, please consider leaving us a comment below to share your experience. Your feedback means a lot to us! You can also tag us on Instagram @cooking_with_wine to show off your culinary masterpiece. Happy cooking!
Discover More Delightful Recipes Like This
If you’re looking for more exciting recipes that blend fresh ingredients with robust flavors, explore these related dishes that complement a similar culinary style:
- Jalapeño Spinach Artichoke Dip Recipe
- Summer Farro Salad with Zucchini Asparagus and Feta
- White Wine Garlic Butter Sautéed Oyster Mushrooms
- Italian Herb Sautéed Zucchini Squash Recipe
Perfect Pairings: What to Serve with Stuffed Poblano Peppers
These versatile cheese stuffed poblano peppers make an excellent side dish, but they also shine alongside a variety of main courses. Here are some of our favorite complementary dishes that create a truly memorable meal:
- Marinated Lamb Chops with Mint and Cilantro Yogurt Sauce
- Dry-Rubbed Roasted Pork Tenderloin Recipe
- Grilled Marinated Tri Tip Steak – Ultimate Marinade Recipe
- Crispy Sous Vide Pork Belly Bites with Ginger Soy Glaze
đź“– Recipe Card

Cheese Stuffed Poblano Peppers
A delightful twist on traditional chile rellenos (without frying), this easy Cheese Stuffed Poblano Peppers recipe is perfect to enjoy as a versatile side or a satisfying main dish!
10 mins
25 mins
35 mins
Main Course, Side Dish
Mexican
4
414 kcal
Equipment
- 1 sheet tray
- Sharp knife
- Cutting board
- Mixing bowl
- Dry pan (skillet)
Ingredients
- 4 Poblano peppers, whole
- â…“ cup pine nuts
- 10 oz Muenster cheese, cut in small dice
- 1 teaspoon smoked paprika
- 1 teaspoon fresh thyme leaves
Instructions
PREPARE THE PEPPERS
- Preheat your oven to 350°F (175°C).
- Slice the very top of each poblano pepper off lengthwise, ensuring the stem remains intact while exposing the seed pod. Reserve the sliced-off pepper pieces and dice them into small pieces for the filling. Gently remove the seeds and any excess white pith from inside the peppers to create a boat-like vessel for the stuffing.
- Once the peppers are cleaned, place them on a baking sheet and bake in the preheated oven for 15 minutes to par-cook them. Remove from the oven and let them cool slightly before stuffing.
STUFF AND COOK THE PEPPERS
- While the empty peppers are baking, toast the pine nuts in a dry pan over medium heat for about 3-4 minutes until lightly golden and fragrant. Combine the toasted pine nuts with the Muenster cheese (cut in small dice) and the small-diced raw excess pepper pieces. Stuff the par-cooked peppers generously with this mixture.
- Place your now-stuffed peppers back on the baking sheet and return to the oven for 5 minutes. Remove from the oven.
- Turn your oven to broil and allow it to heat up for a few minutes. Place the stuffed peppers in the oven on the center rack for about 2-3 more minutes, or until the cheese is completely melted, bubbly, and lightly golden. Watch carefully to prevent burning.
- Once the peppers are done, remove from the oven. Immediately sprinkle the smoked paprika and fresh thyme leaves over the peppers and serve hot.
Nutrition Facts
Calories: 414 kcal
Carbohydrates: 8g
Protein: 23g
Fat: 33g
Saturated Fat: 17g
Polyunsaturated Fat: 5g
Monounsaturated Fat: 10g
Cholesterol: 82mg
Sodium: 538mg
Potassium: 404mg
Fiber: 3g
Sugar: 4g
Vitamin A: 1574 IU
Vitamin C: 97mg
Calcium: 627mg
Iron: 2mg
Keywords: poblano peppers, vegetarian, stuffed peppers, cheese, baked, healthy Mexican
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